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LOC103500580 mitochondrial arginine transporter BAC2-like [ Cucumis melo (muskmelon) ]

Gene ID: 103500580, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103500580
Gene description
mitochondrial arginine transporter BAC2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103500580 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 1 NC_066857.1 (36619380..36620933)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546334.1 (166542..168103)

Chromosome 1 - NC_066857.1Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 Neighboring gene putative pentatricopeptide repeat-containing protein At3g23330 Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene kinesin-like protein KIN-13B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066857.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    36619380..36620933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008463934.2 → XP_008462156.1  mitochondrial arginine transporter BAC2-like

    UniProtKB/TrEMBL
    A0A1S3CGB7, A0A5A7V0B9
    Conserved Domains (1) summary
    pfam00153
    Location:208 → 303
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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