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LOC103498676 uncharacterized LOC103498676 [ Cucumis melo (muskmelon) ]

Gene ID: 103498676, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103498676
Gene description
uncharacterized LOC103498676
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103498676 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 9 NC_066865.1 (694777..703817)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546318.1 (1976634..1985638, complement)

Chromosome 9 - NC_066865.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103498681 Neighboring gene 40S ribosomal protein S9-2 Neighboring gene succinate dehydrogenase assembly factor 1, mitochondrial Neighboring gene molybdopterin synthase sulfur carrier subunit Neighboring gene uncharacterized LOC103498673

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC103498676
Names
non-lysosomal glucosylceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066865.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    694777..703817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008461370.2 → XP_008459592.2  uncharacterized protein LOC103498676 isoform X2

  2. XM_017046942.2 → XP_016902431.2  uncharacterized protein LOC103498676 isoform X1

  3. XM_008461371.3 → XP_008459593.2  uncharacterized protein LOC103498676 isoform X3

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases