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LOC103497682 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Cucumis melo (muskmelon) ]

Gene ID: 103497682, updated on 6-Jun-2024

Summary

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Gene symbol
LOC103497682
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103497682 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 11 NC_066867.1 (31146203..31152575)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546314.1 (259586..265732, complement)

Chromosome 11 - NC_066867.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC103497681 Neighboring gene BAG family molecular chaperone regulator 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066867.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    31146203..31152575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051091991.1 → XP_050947948.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A1S3C6R3, A0A1S4E251

  2. XM_008459937.3 → XP_008458159.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    See identical proteins and their annotated locations for XP_008458159.1

    UniProtKB/TrEMBL
    A0A1S3C6R3, A0A1S4E251
    Conserved Domains (1) summary
    pfam03407
    Location:116 → 335
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

  3. XM_008459938.3 → XP_008458160.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    See identical proteins and their annotated locations for XP_008458160.1

    UniProtKB/TrEMBL
    A0A1S3C6R3, A0A1S4E251
    Conserved Domains (1) summary
    pfam03407
    Location:116 → 335
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase

RNA

  1. XR_007824932.1 RNA Sequence

Nucleotide Protein
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