U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103497220 L-ascorbate peroxidase, cytosolic [ Cucumis melo (muskmelon) ]

Gene ID: 103497220, updated on 13-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
LOC103497220
Gene description
L-ascorbate peroxidase, cytosolic
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC103497220 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 12 NC_066868.1 (3525389..3527828, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546311.1 (3114298..3116737, complement)

Chromosome 12 - NC_066868.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127144460 Neighboring gene mitogen-activated protein kinase 3 Neighboring gene uncharacterized LOC127144461 Neighboring gene uncharacterized LOC127144396

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular cloning, characterization and expression analysis of CmAPX. Cheng H, et al. Mol Biol Rep, 2009 Jul. PMID 18756374

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
L-ascorbate peroxidase, cytosolic
Names
ascorbate peroxidase
NP_001284378.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001297449.1 → NP_001284378.1  L-ascorbate peroxidase, cytosolic

    See identical proteins and their annotated locations for NP_001284378.1

    Status: PROVISIONAL

    Source sequence(s)
    EF693949
    UniProtKB/TrEMBL
    A0A9I9DM99, A7LAR0
    Conserved Domains (1) summary
    cd00691
    Location:5 → 249
    ascorbate_peroxidase; Ascorbate peroxidases and cytochrome C peroxidases

RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066868.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    3525389..3527828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases