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LOC103496163 probable receptor-like protein kinase At1g49730 [ Cucumis melo (muskmelon) ]

Gene ID: 103496163, updated on 10-Oct-2024

Summary

Gene symbol
LOC103496163
Gene description
probable receptor-like protein kinase At1g49730
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

See LOC103496163 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 6 NC_066862.1 (11528679..11536001, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546305.1 (2412726..2417678, complement)

Chromosome 6 - NC_066862.1Genomic Context describing neighboring genes Neighboring gene autophagy-related protein 2 Neighboring gene uncharacterized LOC127149929 Neighboring gene glycoprotein 3-alpha-L-fucosyltransferase A-like Neighboring gene uncharacterized LOC107992276 Neighboring gene uncharacterized LOC103496165

Genomic regions, transcripts, and products

General protein information

Preferred Names
probable receptor-like protein kinase At1g49730

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066862.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    11528679..11536001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008457912.3XP_008456134.1  probable receptor-like protein kinase At1g49730 isoform X1

    UniProtKB/TrEMBL
    A0A1S3C241, A0A9I9DJN9
    Conserved Domains (2) summary
    cd14066
    Location:333604
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00069
    Location:332602
    Pkinase; Protein kinase domain
  2. XM_051086325.1XP_050942282.1  probable receptor-like protein kinase At1g49730 isoform X1

    UniProtKB/TrEMBL
    A0A1S3C241
  3. XM_051086327.1XP_050942284.1  probable receptor-like protein kinase At1g49730 isoform X3

  4. XM_008457913.3XP_008456135.1  probable receptor-like protein kinase At1g49730 isoform X2

    UniProtKB/TrEMBL
    A0A1S3C2M3, A0A5A7T4Q9, A0A9I9DJN9
    Conserved Domains (1) summary
    cd14066
    Location:333595
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs