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LOC103496113 UDP-glucose:glycoprotein glucosyltransferase [ Cucumis melo (muskmelon) ]

Gene ID: 103496113, updated on 25-Jan-2024

Summary

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Gene symbol
LOC103496113
Gene description
UDP-glucose:glycoprotein glucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103496113 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
37
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 6 NC_066862.1 (10442259..10482129)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546305.1 (1321202..1361351)

Chromosome 6 - NC_066862.1Genomic Context describing neighboring genes Neighboring gene potassium channel AKT2/3 Neighboring gene uncharacterized LOC127150089 Neighboring gene probable receptor-like protein kinase At1g11050 Neighboring gene membralin-like protein At1g60995

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose:glycoprotein glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066862.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    10442259..10482129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008457848.3 → XP_008456070.1  UDP-glucose:glycoprotein glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A1S3C2H1
    Conserved Domains (2) summary
    cd06432
    Location:1326 → 1573
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:35 → 1257
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase

  2. XM_008457847.3 → XP_008456069.1  UDP-glucose:glycoprotein glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1S3C1Y4
    Conserved Domains (2) summary
    cd06432
    Location:1328 → 1575
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:35 → 1257
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
Heading Accession and Version

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