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LOC103494556 phosphoglucan, water dikinase, chloroplastic [ Cucumis melo (muskmelon) ]

Gene ID: 103494556, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103494556
Gene description
phosphoglucan, water dikinase, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103494556 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 7 NC_066863.1 (27427006..27440880, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546298.1 (1783829..1797804, complement)

Chromosome 7 - NC_066863.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103494554 Neighboring gene rho GDP-dissociation inhibitor 1-like Neighboring gene probable xyloglucan galactosyltransferase GT14 Neighboring gene probable aldo-keto reductase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglucan, water dikinase, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066863.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    27427006..27440880 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051087327.1 → XP_050943284.1  phosphoglucan, water dikinase, chloroplastic isoform X2

  2. XM_008455784.3 → XP_008454006.2  phosphoglucan, water dikinase, chloroplastic isoform X1

Nucleotide Protein
Heading Accession and Version

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