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LOC103493807 dolichol-phosphate mannosyltransferase subunit 1 [ Cucumis melo (muskmelon) ]

Gene ID: 103493807, updated on 3-Dec-2024

Summary

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Gene symbol
LOC103493807
Gene description
dolichol-phosphate mannosyltransferase subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103493807 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 7 NC_066863.1 (411752..415087)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546296.1 (3840648..3843843, complement)

Chromosome 7 - NC_066863.1Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein At2g30600 Neighboring gene small nuclear ribonucleoprotein SmD3a Neighboring gene butanoate--CoA ligase AAE1-like Neighboring gene butanoate--CoA ligase AAE1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066863.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    411752..415087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008454727.3 → XP_008452949.2  dolichol-phosphate mannosyltransferase subunit 1

    UniProtKB/TrEMBL
    A0A1S3BV11, A0A5A7VE99
Nucleotide Protein
Heading Accession and Version

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