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LOC103493242 exopolygalacturonase [ Cucumis melo (muskmelon) ]

Gene ID: 103493242, updated on 10-Oct-2024

Summary

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Gene symbol
LOC103493242
Gene description
exopolygalacturonase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103493242 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 7 NC_066863.1 (22632682..22634175)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546294.1 (1607125..1608614)

Chromosome 7 - NC_066863.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103492972 Neighboring gene E3 ubiquitin-protein ligase DA2L Neighboring gene polyadenylate-binding protein-interacting protein 9 Neighboring gene ABC transporter G family member 51-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exopolygalacturonase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066863.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    22632682..22634175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017045662.2 → XP_016901151.2  exopolygalacturonase

    UniProtKB/TrEMBL
    A0A5A7V6Y6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases