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LOC103490530 callose synthase 12-like [ Cucumis melo (muskmelon) ]

Gene ID: 103490530, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103490530
Gene description
callose synthase 12-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103490530 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 11 NC_066867.1 (18771863..18777913)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546287.1 (4315344..4321367)

Chromosome 11 - NC_066867.1Genomic Context describing neighboring genes Neighboring gene riboflavin synthase-like Neighboring gene uncharacterized LOC103490527 Neighboring gene small nucleolar RNA J33 Neighboring gene mannan endo-1,4-beta-mannosidase 2 Neighboring gene uncharacterized LOC103490533

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066867.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    18771863..18777913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008450070.3 → XP_008448292.1  callose synthase 12-like

    UniProtKB/TrEMBL
    A0A1S3BJD1, A0A5D3C0T1
    Conserved Domains (2) summary
    pfam02364
    Location:868 → 1632
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:153 → 266
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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