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LOC103489654 callose synthase 7 [ Cucumis melo (muskmelon) ]

Gene ID: 103489654, updated on 10-Oct-2024

Summary

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Gene symbol
LOC103489654
Gene description
callose synthase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103489654 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
43
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 1 NC_066857.1 (21000269..21022281)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546284.1 (3085164..3107213)

Chromosome 1 - NC_066857.1Genomic Context describing neighboring genes Neighboring gene protein CYSTEINE-RICH TRANSMEMBRANE MODULE 6-like Neighboring gene uncharacterized LOC127149899 Neighboring gene probable receptor-like protein kinase At2g42960 Neighboring gene WRKY transcription factor 71-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066857.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    21000269..21022281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008448906.3 → XP_008447128.1  callose synthase 7 isoform X1

    UniProtKB/TrEMBL
    A0A1S3BG55, A0A5A7UN44
    Conserved Domains (3) summary
    pfam02364
    Location:1042 → 1784
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:55 → 177
    Vta1; Vta1 like
    pfam14288
    Location:333 → 445
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_051086484.1 → XP_050942441.1  callose synthase 7 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases