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LOC103489608 arabinosyltransferase RRA3-like [ Cucumis melo (muskmelon) ]

Gene ID: 103489608, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103489608
Gene description
arabinosyltransferase RRA3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103489608 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 1 NC_066857.1 (19579763..19582900)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546284.1 (1688253..1690983)

Chromosome 1 - NC_066857.1Genomic Context describing neighboring genes Neighboring gene BAG family molecular chaperone regulator 4-like Neighboring gene putative pentatricopeptide repeat-containing protein At3g18840 Neighboring gene deSI-like protein At4g17486 Neighboring gene NEDD8-conjugating enzyme Ubc12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066857.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    19579763..19582900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008448829.2 → XP_008447051.1  arabinosyltransferase RRA3-like

    UniProtKB/TrEMBL
    A0A1S3BH40, A0A5A7T4P1
    Conserved Domains (1) summary
    pfam03407
    Location:188 → 407
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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