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LOC103488794 alpha-galactosidase 2 [ Cucumis melo (muskmelon) ]

Gene ID: 103488794, updated on 10-Oct-2024

Summary

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Gene symbol
LOC103488794
Gene description
alpha-galactosidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103488794 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 10 NC_066866.1 (4991620..4996089, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546283.1 (690373..694326)

Chromosome 10 - NC_066866.1Genomic Context describing neighboring genes Neighboring gene katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like Neighboring gene uncharacterized LOC103488796 Neighboring gene alpha-galactosidase 1 Neighboring gene pyruvate kinase, cytosolic isozyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-galactosidase 2; alpha-galactosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066866.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    4991620..4996089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008447689.2 → XP_008445911.1  alpha-galactosidase isoform X1

    UniProtKB/TrEMBL
    A0A1S3BEH7, A0A5A7SVZ2
    Conserved Domains (2) summary
    PLN02692
    Location:31 → 418
    PLN02692; alpha-galactosidase
    cl07893
    Location:39 → 419
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_051091326.1 → XP_050947283.1  alpha-galactosidase 2 isoform X2

  3. XM_051091325.1 → XP_050947282.1  alpha-galactosidase isoform X1

    UniProtKB/TrEMBL
    A0A1S3BEH7
Nucleotide Protein
Heading Accession and Version

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