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LOC103488325 hydroxyproline O-galactosyltransferase HPGT3 [ Cucumis melo (muskmelon) ]

Gene ID: 103488325, updated on 10-Oct-2024

Summary

Gene symbol
LOC103488325
Gene description
hydroxyproline O-galactosyltransferase HPGT3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

See LOC103488325 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 3 NC_066859.1 (26700998..26705812, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546281.1 (4341957..4346768)

Chromosome 3 - NC_066859.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103488327 Neighboring gene uncharacterized LOC103488326 Neighboring gene probable glycosyltransferase At5g25310 Neighboring gene pEARLI1-like lipid transfer protein 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
hydroxyproline O-galactosyltransferase HPGT3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066859.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    26700998..26705812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008447015.3XP_008445237.1  hydroxyproline O-galactosyltransferase HPGT3 isoform X2

    UniProtKB/TrEMBL
    A0A1S3BCY2, A0A5A7V979
    Conserved Domains (2) summary
    pfam13334
    Location:2299
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:134329
    Galactosyl_T; Galactosyltransferase
  2. XM_051082181.1XP_050938138.1  hydroxyproline O-galactosyltransferase HPGT3 isoform X1