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LOC103485211 probable galacturonosyltransferase 4 [ Cucumis melo (muskmelon) ]

Gene ID: 103485211, updated on 23-Nov-2023

Summary

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Gene symbol
LOC103485211
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis melo
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC103485211 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 8 NC_066864.1 (6603738..6608696, complement)
101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546274.1 (6635894..6640845, complement)

Chromosome 8 - NC_066864.1Genomic Context describing neighboring genes Neighboring gene protein PHR1-LIKE 3-like Neighboring gene probable E3 ubiquitin-protein ligase WAVH2 Neighboring gene ras-related protein RABB1c-like Neighboring gene microRNA MIR160d

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_Cmelo_AY_1.0 Primary Assembly

Genomic

  1. NC_066864.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Range
    6603738..6608696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008442727.3 → XP_008440949.2  probable galacturonosyltransferase 4 isoform X1

  2. XM_017043830.2 → XP_016899319.2  probable galacturonosyltransferase 4 isoform X1

  3. XM_008442725.3 → XP_008440947.2  probable galacturonosyltransferase 4 isoform X1

  4. XM_051088982.1 → XP_050944939.1  probable galacturonosyltransferase 4 isoform X2

Nucleotide Protein
Heading Accession and Version

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