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n6amt1 N-6 adenine-specific DNA methyltransferase 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103476720, updated on 11-Mar-2024

Summary

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Gene symbol
n6amt1
Gene description
N-6 adenine-specific DNA methyltransferase 1
See related
Ensembl:ENSPREG00000006451
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See n6amt1 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
7
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG2 NC_024332.1 (626120..629684, complement)

Linkage Group LG2 - NC_024332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103476736 Neighboring gene uncharacterized LOC103476728 Neighboring gene multidrug resistance-associated protein 4-like Neighboring gene phosphoribosylglycinamide formyltransferase Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene protein O-glucosyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024332.1 Chromosome LG2 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eRF1 methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hemK methyltransferase family member 2
Names
N-6 adenine-specific DNA methyltransferase 1 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024332.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    626120..629684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008429247.2 → XP_008427469.1  hemK methyltransferase family member 2

    UniProtKB/TrEMBL
    A0A3P9NIV9
    Related
    ENSPREP00000009516.1, ENSPRET00000009628.1
    Conserved Domains (2) summary
    COG2890
    Location:19 → 215
    HemK; Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]
    cl17173
    Location:20 → 214
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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