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adad1 adenosine deaminase domain containing 1 (testis-specific) [ Poecilia reticulata (guppy) ]

Gene ID: 103471874, updated on 11-Mar-2024

Summary

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Gene symbol
adad1
Gene description
adenosine deaminase domain containing 1 (testis-specific)
See related
Ensembl:ENSPREG00000006635
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See adad1 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
14
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG10 NC_024340.1 (28552602..28565921, complement)

Linkage Group LG10 - NC_024340.1Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 12 Neighboring gene centrin 4 Neighboring gene T cell leukemia homeobox 2 Neighboring gene nucleophosmin 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024340.1 Chromosome LG10 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine deaminase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024340.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    28552602..28565921 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008421136.1 → XP_008419358.1  adenosine deaminase domain-containing protein 1

    See identical proteins and their annotated locations for XP_008419358.1

    UniProtKB/TrEMBL
    A0A3P9NJZ1
    Conserved Domains (2) summary
    smart00358
    Location:82 → 146
    DSRM; Double-stranded RNA binding motif
    pfam02137
    Location:236 → 551
    A_deamin; Adenosine-deaminase (editase) domain

  2. XM_008421134.1 → XP_008419356.1  adenosine deaminase domain-containing protein 1

    See identical proteins and their annotated locations for XP_008419356.1

    UniProtKB/TrEMBL
    A0A3P9NJZ1
    Related
    ENSPREP00000009803.1, ENSPRET00000009919.1
    Conserved Domains (2) summary
    smart00358
    Location:82 → 146
    DSRM; Double-stranded RNA binding motif
    pfam02137
    Location:236 → 551
    A_deamin; Adenosine-deaminase (editase) domain

  3. XM_008421135.1 → XP_008419357.1  adenosine deaminase domain-containing protein 1

    See identical proteins and their annotated locations for XP_008419357.1

    UniProtKB/TrEMBL
    A0A3P9NJZ1
    Conserved Domains (2) summary
    smart00358
    Location:82 → 146
    DSRM; Double-stranded RNA binding motif
    pfam02137
    Location:236 → 551
    A_deamin; Adenosine-deaminase (editase) domain
Nucleotide Protein
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