U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hemk1 HemK methyltransferase family member 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103464503, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
hemk1
Gene description
HemK methyltransferase family member 1
See related
Ensembl:ENSPREG00000004802
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hemk1 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
12
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG5 NC_024335.1 (5625133..5636340)

Linkage Group LG5 - NC_024335.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 1 Neighboring gene zinc finger, MYND-type containing 10 Neighboring gene NPR2 like, GATOR1 complex subunit Neighboring gene cytokine inducible SH2-containing protein a Neighboring gene twinfilin actin binding protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_024335.1 Chromosome LG5 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hemK methyltransferase family member 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024335.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    5625133..5636340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008408649.2 → XP_008406871.1  hemK methyltransferase family member 1 isoform X2

    Conserved Domains (2) summary
    PRK09328
    Location:52 → 325
    PRK09328; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
    cl17173
    Location:60 → 294
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_008408648.2 → XP_008406870.1  hemK methyltransferase family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A3P9NBN8
    Related
    ENSPREP00000006976.1, ENSPRET00000007066.1
    Conserved Domains (2) summary
    PRK09328
    Location:63 → 336
    PRK09328; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
    cl17173
    Location:71 → 305
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.