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LOC103451095 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [ Malus domestica (apple) ]

Gene ID: 103451095, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103451095
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103451095 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
28
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 12 NC_041800.1 (32280393..32290248)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 12 NC_024250.1 (30851478..30861235, complement)

Chromosome 12 - NC_041800.1Genomic Context describing neighboring genes Neighboring gene protein PIR Neighboring gene probable leucine-rich repeat receptor-like protein kinase At5g63930 Neighboring gene U-box domain-containing protein 9-like Neighboring gene uncharacterized LOC103451093

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041800.1 Reference ASM211411v1 Primary Assembly

    Range
    32280393..32290248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029090176.1 → XP_028946009.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

    Conserved Domains (3) summary
    TIGR02917
    Location:67 → 501
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:260 → 288
    TPR; TPR repeat [structural motif]
    cl10013
    Location:595 → 954
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

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