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LOC103442345 probable monogalactosyldiacylglycerol synthase, chloroplastic [ Malus domestica (apple) ]

Gene ID: 103442345, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103442345
Gene description
probable monogalactosyldiacylglycerol synthase, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103442345 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 15 NC_041803.1 (2992359..2995930, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 1 NC_024239.1 (26677424..26680977, complement)

Chromosome 15 - NC_041803.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 4-like Neighboring gene solute carrier family 35 member F5-like Neighboring gene VQ motif-containing protein 4-like Neighboring gene chaperone protein DnaJ

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable monogalactosyldiacylglycerol synthase, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041803.1 Reference ASM211411v1 Primary Assembly

    Range
    2992359..2995930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008381127.3 → XP_008379349.1  probable monogalactosyldiacylglycerol synthase, chloroplastic

    UniProtKB/TrEMBL
    A0A498JD95
    Conserved Domains (3) summary
    PLN02605
    Location:153 → 532
    PLN02605; monogalactosyldiacylglycerol synthase
    pfam06925
    Location:164 → 332
    MGDG_synth; Monogalactosyldiacylglycerol (MGDG) synthase
    cl10013
    Location:296 → 522
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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