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LOC103438685 dolichol-phosphate mannosyltransferase subunit 1 [ Malus domestica (apple) ]

Gene ID: 103438685, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103438685
Gene description
dolichol-phosphate mannosyltransferase subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103438685 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 6 NC_041794.1 (26783711..26786704, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 7 NC_024245.1 (4942440..4945436)

Chromosome 6 - NC_041794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103438687 Neighboring gene E3 ubiquitin-protein ligase MARCH3 Neighboring gene uncharacterized LOC103410000 Neighboring gene WAT1-related protein At3g30340

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041794.1 Reference ASM211411v1 Primary Assembly

    Range
    26783711..26786704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008377230.3 → XP_008375452.1  dolichol-phosphate mannosyltransferase subunit 1

    Conserved Domains (2) summary
    cd06442
    Location:9 → 234
    DPM1_like; DPM1_like represents putative enzymes similar to eukaryotic DPM1
    PLN02726
    Location:1 → 238
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein
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