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LOC103437913 probable galacturonosyltransferase 11 [ Malus domestica (apple) ]

Gene ID: 103437913, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103437913
Gene description
probable galacturonosyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103437913 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 6 NC_041794.1 (34111470..34116481)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 6 NC_024244.1 (22143223..22148254, complement)

Chromosome 6 - NC_041794.1Genomic Context describing neighboring genes Neighboring gene universal stress protein PHOS32-like Neighboring gene ADP,ATP carrier protein ER-ANT1-like Neighboring gene flavonol 4'-sulfotransferase-like Neighboring gene cytosolic sulfotransferase 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041794.1 Reference ASM211411v1 Primary Assembly

    Range
    34111470..34116481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008376439.3 → XP_008374661.1  probable galacturonosyltransferase 11

    UniProtKB/TrEMBL
    A0A498JKL5
    Conserved Domains (2) summary
    cd06429
    Location:230 → 523
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02742
    Location:1 → 535
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
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