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LOC103434258 probable glycosyltransferase At5g20260 [ Malus domestica (apple) ]

Gene ID: 103434258, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103434258
Gene description
probable glycosyltransferase At5g20260
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103434258 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 4 NC_041792.1 (30649868..30653998, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 4 NC_024242.1 (22559869..22566851, complement)

Chromosome 4 - NC_041792.1Genomic Context describing neighboring genes Neighboring gene probable glycosyltransferase At3g42180 Neighboring gene probable glycosyltransferase At5g20260 Neighboring gene S-protein homolog 2-like Neighboring gene uncharacterized LOC108173244

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glycosyltransferase At5g20260

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041792.1 Reference ASM211411v1 Primary Assembly

    Range
    30649868..30653998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029101533.1 → XP_028957366.1  probable glycosyltransferase At5g20260 isoform X2

    Conserved Domains (1) summary
    pfam03016
    Location:164 → 448
    Exostosin; Exostosin family

  2. XM_029101532.1 → XP_028957365.1  probable glycosyltransferase At5g20260 isoform X1

    Conserved Domains (1) summary
    pfam03016
    Location:165 → 449
    Exostosin; Exostosin family
Nucleotide Protein
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