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LOC103423170 glucomannan 4-beta-mannosyltransferase 9-like [ Malus domestica (apple) ]

Gene ID: 103423170, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103423170
Gene description
glucomannan 4-beta-mannosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103423170 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 12 NC_041800.1 (1801927..1808005)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 12 Unlocalized Scaffold (alt_haplotype2.MalDomGD1.0) NW_007545744.1 (1336454..1342460, complement)

Chromosome 12 - NC_041800.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103449380 Neighboring gene uncharacterized LOC103449381 Neighboring gene pentatricopeptide repeat-containing protein At5g12100, mitochondrial Neighboring gene peroxiredoxin-2E-2, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9-like
Names
probable mannan synthase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041800.1 Reference ASM211411v1 Primary Assembly

    Range
    1801927..1808005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029090382.1 → XP_028946215.1  glucomannan 4-beta-mannosyltransferase 9-like isoform X1

    UniProtKB/TrEMBL
    A0A498IEF3
    Conserved Domains (1) summary
    cd06437
    Location:97 → 333
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

  2. XM_008361244.3 → XP_008359466.2  glucomannan 4-beta-mannosyltransferase 9-like isoform X2

    UniProtKB/TrEMBL
    A0A498IEF3
    Conserved Domains (1) summary
    cd06437
    Location:97 → 333
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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