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LOC103422182 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like [ Malus domestica (apple) ]

Gene ID: 103422182, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103422182
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103422182 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 10 NC_041798.1 (22788601..22794154)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 10 Unlocalized Scaffold (alt_haplotype2.MalDomGD1.0) NW_007545706.1 (4472..10188)

Chromosome 10 - NC_041798.1Genomic Context describing neighboring genes Neighboring gene amino acid transporter AVT3B-like Neighboring gene TMV resistance protein N-like Neighboring gene amino acid transporter AVT3B-like Neighboring gene nucleolar complex protein 4 homolog Neighboring gene uncharacterized LOC103422220

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041798.1 Reference ASM211411v1 Primary Assembly

    Range
    22788601..22794154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008360218.3 → XP_008358440.2  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like

    UniProtKB/TrEMBL
    A0A498J1D8
    Conserved Domains (1) summary
    cl11394
    Location:20 → 441
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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