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LOC103407352 glucomannan 4-beta-mannosyltransferase 9-like [ Malus domestica (apple) ]

Gene ID: 103407352, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103407352
Gene description
glucomannan 4-beta-mannosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103407352 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 7 NC_041795.1 (6799263..6803910, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 2 Unlocalized Scaffold (alt_haplotype1.MalDomGD1.0) NW_007545085.1 (2211478..2212542)

Chromosome 7 - NC_041795.1Genomic Context describing neighboring genes Neighboring gene eEF1A lysine and N-terminal methyltransferase Neighboring gene transcriptional activator DEMETER-like Neighboring gene DEAD-box ATP-dependent RNA helicase 40-like Neighboring gene GABA transporter 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041795.1 Reference ASM211411v1 Primary Assembly

    Range
    6799263..6803910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029105397.1 → XP_028961230.1  glucomannan 4-beta-mannosyltransferase 9-like

    Conserved Domains (1) summary
    cd06437
    Location:81 → 317
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
Nucleotide Protein
Heading Accession and Version

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