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LOC103406178 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Malus domestica (apple) ]

Gene ID: 103406178, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103406178
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103406178 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 1 NC_041789.1 (17912321..17915255)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 1 Unlocalized Scaffold (alt_haplotype1.MalDomGD1.0) NW_007545050.1 (47481..50464)

Chromosome 1 - NC_041789.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103417611 Neighboring gene protein ABIL1-like Neighboring gene uncharacterized LOC103407019 Neighboring gene rRNA-processing protein FCF1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041789.1 Reference ASM211411v1 Primary Assembly

    Range
    17912321..17915255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008345186.3 → XP_008343408.2  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A498KJ83
    Conserved Domains (1) summary
    pfam03407
    Location:117 → 336
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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