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LOC103405188 probable galacturonosyltransferase 15 [ Malus domestica (apple) ]

Gene ID: 103405188, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103405188
Gene description
probable galacturonosyltransferase 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103405188 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 17 NC_041805.1 (12765086..12776574)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 17 NC_024255.1 (12150489..12156080)

Chromosome 17 - NC_041805.1Genomic Context describing neighboring genes Neighboring gene trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like Neighboring gene general transcription factor 3C polypeptide 3-like Neighboring gene general transcription factor 3C polypeptide 3-like Neighboring gene agamous-like MADS-box protein AGL1 Neighboring gene uncharacterized LOC114822651

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041805.1 Reference ASM211411v1 Primary Assembly

    Range
    12765086..12776574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008344153.3 → XP_008342375.2  probable galacturonosyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A498J563
    Conserved Domains (1) summary
    PLN02867
    Location:1 → 526
    PLN02867; Probable galacturonosyltransferase

  2. XM_029097543.1 → XP_028953376.1  probable galacturonosyltransferase 15 isoform X2

    Conserved Domains (1) summary
    PLN02867
    Location:1 → 407
    PLN02867; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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