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LOC103403563 GPI mannosyltransferase 3 [ Malus domestica (apple) ]

Gene ID: 103403563, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103403563
Gene description
GPI mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103403563 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 16 NC_041804.1 (32722168..32726756, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 16 NC_024254.1 (9093089..9097654, complement)

Chromosome 16 - NC_041804.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Mb2253c-like Neighboring gene VAN3-binding protein Neighboring gene uncharacterized LOC103403564 Neighboring gene E3 ubiquitin-protein ligase XBAT32-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041804.1 Reference ASM211411v1 Primary Assembly

    Range
    32722168..32726756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008342404.3 → XP_008340626.1  GPI mannosyltransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_008340626.1

    UniProtKB/TrEMBL
    A0A498HPR6
    Conserved Domains (1) summary
    cl21590
    Location:36 → 531
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_008342403.3 → XP_008340625.1  GPI mannosyltransferase 3 isoform X1

    See identical proteins and their annotated locations for XP_008340625.1

    UniProtKB/TrEMBL
    A0A498HPR6
    Conserved Domains (1) summary
    cl21590
    Location:36 → 531
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_017323753.2 → XP_017179242.1  GPI mannosyltransferase 3 isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:36 → 404
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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