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LOC103403060 uncharacterized LOC103403060 [ Malus domestica (apple) ]

Gene ID: 103403060, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103403060
Gene description
uncharacterized LOC103403060
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC103403060 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 16 NC_041804.1 (6971696..6974611, complement)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 16 NC_024254.1 (4902758..4905693)

Chromosome 16 - NC_041804.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103403062 Neighboring gene probable E3 ubiquitin-protein ligase XERICO Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene BTB/POZ domain-containing protein At1g67900-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC103403060

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041804.1 Reference ASM211411v1 Primary Assembly

    Range
    6971696..6974611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008341874.3 → XP_008340096.1  uncharacterized protein LOC103403060

    Conserved Domains (1) summary
    pfam04724
    Location:43 → 390
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
Heading Accession and Version

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