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mgat4c mgat4 family member C [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103398884, updated on 11-Mar-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
See related
Ensembl:ENSCSEG00000017465
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) Unplaced Scaffold NW_007585140.1 (30627..70695, complement)

NW_007585140.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 9 Neighboring gene neurotensin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007585140 Unplaced Scaffold Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Names
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NW_007585140.1 Reference Cse_v1.0 Primary Assembly

    Range
    30627..70695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008337633.2 → XP_008335855.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    UniProtKB/TrEMBL
    A0A3P8WIR0, A0A3P8WLK6
    Related
    ENSCSEP00000027348.1, ENSCSET00000027715.1
    Conserved Domains (1) summary
    pfam04666
    Location:58 → 322
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_017030955.1 → XP_016886444.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

    UniProtKB/TrEMBL
    A0A3P8WLJ6, A0A3P8WLK6
    Related
    ENSCSEP00000027342.1, ENSCSET00000027709.1
    Conserved Domains (1) summary
    pfam04666
    Location:87 → 351
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_025053857.1 → XP_024909625.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X2

    UniProtKB/TrEMBL
    A0A3P8WIR0, A0A3P8WLK6
    Conserved Domains (1) summary
    pfam04666
    Location:58 → 322
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  4. XM_025053856.1 → XP_024909624.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1

    UniProtKB/TrEMBL
    A0A3P8WLJ6, A0A3P8WLK6
    Conserved Domains (1) summary
    pfam04666
    Location:87 → 351
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

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