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pomt1 protein-O-mannosyltransferase 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103397945, updated on 11-Mar-2024

Summary

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Gene symbol
pomt1
Gene description
protein-O-mannosyltransferase 1
See related
Ensembl:ENSCSEG00000008209
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See pomt1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) Z NC_024328.1 (13586473..13593750, complement)

Chromosome Z - NC_024328.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family, member 9 Neighboring gene small nuclear RNA activating complex, polypeptide 4 Neighboring gene rap guanine nucleotide exchange factor 1 Neighboring gene dynamin 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024328.1 Chromosome Z Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024328.1 Reference Cse_v1.0 Primary Assembly

    Range
    13586473..13593750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025053321.1 → XP_024909089.1  protein O-mannosyl-transferase 1

    UniProtKB/TrEMBL
    A0A3P8VEC5
    Related
    ENSCSEP00000012719.1, ENSCSET00000012872.1
    Conserved Domains (1) summary
    COG1928
    Location:26 → 714
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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