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asph aspartate beta-hydroxylase [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103396808, updated on 11-Mar-2024

Summary

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Gene symbol
asph
Gene description
aspartate beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See asph in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 20 NC_024326.1 (13804614..13822684, complement)

Chromosome 20 - NC_024326.1Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family member 5A1-like Neighboring gene lactamase, beta 2 Neighboring gene uncharacterized LOC107990165 Neighboring gene serine/threonine-protein kinase OSR1 pseudogene Neighboring gene serine/threonine-protein kinase OSR1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024326.1 Chromosome 20 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable serine/threonine-protein kinase kinX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024326.1 Reference Cse_v1.0 Primary Assembly

    Range
    13804614..13822684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025052450.1 → XP_024908218.1  probable serine/threonine-protein kinase kinX

    Conserved Domains (1) summary
    pfam05279
    Location:48 → 200
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
Nucleotide Protein
Heading Accession and Version

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