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st6galnac3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103396703, updated on 11-Mar-2024

Summary

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Gene symbol
st6galnac3
Gene description
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
See related
Ensembl:ENSCSEG00000021405
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See st6galnac3 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 20 NC_024326.1 (13116931..13147133)

Chromosome 20 - NC_024326.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase medium chain Neighboring gene Rab geranylgeranyltransferase subunit beta Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class K Neighboring gene adenylate kinase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024326.1 Chromosome 20 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Names
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024326.1 Reference Cse_v1.0 Primary Assembly

    Range
    13116931..13147133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025066178.1 → XP_024921946.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A3P8X2W0
    Related
    ENSCSEP00000033359.1, ENSCSET00000033793.1
    Conserved Domains (1) summary
    pfam00777
    Location:160 → 391
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_017042578.2 → XP_016898067.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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