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polr1h RNA polymerase I subunit H [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103394482, updated on 11-Mar-2024

Summary

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Gene symbol
polr1h
Gene description
RNA polymerase I subunit H
See related
Ensembl:ENSCSEG00000006330
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Also known as
znrd1
Orthologs
human zebrafish all
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Genomic context

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See polr1h in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 18 NC_024324.1 (11730094..11731988, complement)

Chromosome 18 - NC_024324.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor a (TNF superfamily, member 2) Neighboring gene alpha tubulin acetyltransferase 1 Neighboring gene regulator of G-protein signaling 8-like Neighboring gene uncharacterized LOC103394483 Neighboring gene organic cation transporter protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024324.1 Chromosome 18 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in termination of RNA polymerase I transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase I subunit RPA12
Names
zinc ribbon domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024324.1 Reference Cse_v1.0 Primary Assembly

    Range
    11730094..11731988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017041041.2 → XP_016896530.1  DNA-directed RNA polymerase I subunit RPA12

    UniProtKB/TrEMBL
    A0A3P8V384
    Related
    ENSCSEP00000009863.1, ENSCSET00000009977.1
    Conserved Domains (2) summary
    COG1594
    Location:10 → 114
    RPB9; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
    cd10507
    Location:68 → 114
    Zn-ribbon_RPA12; C-terminal zinc ribbon domain of RPA12 subunit of RNA polymerase I
Nucleotide Protein
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