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xylt2 xylosyltransferase II [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103393209, updated on 12-Sep-2024

Summary

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Gene symbol
xylt2
Gene description
xylosyltransferase II
See related
Ensembl:ENSCSEG00000017735
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See xylt2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 17 NC_024323.1 (10644162..10655032, complement)

Chromosome 17 - NC_024323.1Genomic Context describing neighboring genes Neighboring gene NHERF family PDZ scaffold protein 1b Neighboring gene ras-related protein Rab-37-like Neighboring gene E3 ubiquitin-protein ligase TRIM69-like Neighboring gene uncharacterized LOC103393204 Neighboring gene RecQ helicase-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024323.1 Chromosome 17 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024323.1 Reference Cse_v1.0 Primary Assembly

    Range
    10644162..10655032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008330086.3 → XP_008328308.1  xylosyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8WQK5
    Related
    ENSCSEP00000027771.1, ENSCSET00000028142.1
    Conserved Domains (2) summary
    pfam02485
    Location:253 → 505
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:538 → 716
    Xylo_C; Xylosyltransferase C terminal
Nucleotide Protein
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