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gys1 glycogen synthase 1 (muscle) [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103392977, updated on 18-Sep-2024

Summary

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Gene symbol
gys1
Gene description
glycogen synthase 1 (muscle)
See related
Ensembl:ENSCSEG00000013807
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See gys1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 17 NC_024323.1 (7559717..7569623)

Chromosome 17 - NC_024323.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 7a Neighboring gene GTPase KRas Neighboring gene polymerase (DNA directed), delta 1, catalytic subunit Neighboring gene aspartate dehydrogenase domain containing Neighboring gene transmembrane protein 86B Neighboring gene HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024323.1 Chromosome 17 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024323.1 Reference Cse_v1.0 Primary Assembly

    Range
    7559717..7569623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008329763.3 → XP_008327985.2  glycogen [starch] synthase, muscle

    UniProtKB/TrEMBL
    A0A3P8W510
    Related
    ENSCSEP00000021632.1, ENSCSET00000021910.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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