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pofut2 protein O-fucosyltransferase 2 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103392214, updated on 11-Mar-2024

Summary

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Gene symbol
pofut2
Gene description
protein O-fucosyltransferase 2
See related
Ensembl:ENSCSEG00000011964
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See pofut2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 16 NC_024322.1 (13392866..13396615, complement)

Chromosome 16 - NC_024322.1Genomic Context describing neighboring genes Neighboring gene BRCA1 associated RING domain 1 Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 12 Neighboring gene tubulin alpha chain-like Neighboring gene tubulin alpha chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024322.1 Chromosome 16 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024322.1 Reference Cse_v1.0 Primary Assembly

    Range
    13392866..13396615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008328781.3 → XP_008327003.1  GDP-fucose protein O-fucosyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8VTW5, A0A3P8VWI0
    Related
    ENSCSEP00000018683.1, ENSCSET00000018916.1
    Conserved Domains (2) summary
    cd11298
    Location:57 → 427
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
    pfam10250
    Location:62 → 421
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein
Heading Accession and Version

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