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LOC103391297 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103391297, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103391297
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
See related
Ensembl:ENSCSEG00000016970
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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Genomic context

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See LOC103391297 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 15 NC_024321.1 (16854959..16865172, complement)

Chromosome 15 - NC_024321.1Genomic Context describing neighboring genes Neighboring gene farnesyltransferase, CAAX box, subunit alpha Neighboring gene AUP1 lipid droplet regulating VLDL assembly factor Neighboring gene cathepsin F Neighboring gene eukaryotic translation initiation factor 1A domain containing Neighboring gene N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like Neighboring gene neuregulin 2b Neighboring gene purine-rich element binding protein Ab

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024321.1 Chromosome 15 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of differential genes in the ovary relative to the testis and their expression patterns in half-smooth tongue sole (Cynoglossus semilaevis). Sun Y, et al. J Genet Genomics, 2010 Feb. PMID 20227047
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024321.1 Reference Cse_v1.0 Primary Assembly

    Range
    16854959..16865172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025062980.1 → XP_024918748.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  2. XM_025062979.1 → XP_024918747.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Related
    ENSCSEP00000026562.1, ENSCSET00000026915.1
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  3. XM_008327509.3 → XP_008325731.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  4. XM_025062975.1 → XP_024918743.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  5. XM_025062976.1 → XP_024918744.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  6. XM_025062977.1 → XP_024918745.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase

  7. XM_025062978.1 → XP_024918746.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A3P8WJA3
    Conserved Domains (1) summary
    cl21608
    Location:194 → 388
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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