U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

st6galnac4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103390091, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
st6galnac4
Gene description
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
See related
Ensembl:ENSCSEG00000015229
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See st6galnac4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 14 NC_024320.1 (20945418..20950037, complement)

Chromosome 14 - NC_024320.1Genomic Context describing neighboring genes Neighboring gene DAB2 interacting protein b Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene mitoguardin 2 Neighboring gene dolichyldiphosphatase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_024320.1 Chromosome 14 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
Names
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024320.1 Reference Cse_v1.0 Primary Assembly

    Range
    20945418..20950037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008325814.3 → XP_008324036.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A3P8WBP2
    Related
    ENSCSEP00000023882.1, ENSCSET00000024202.1
    Conserved Domains (1) summary
    pfam00777
    Location:54 → 252
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_025062581.1 → XP_024918349.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:65 → 261
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.