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b3gat2 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103386917, updated on 11-Mar-2024

Summary

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Gene symbol
b3gat2
Gene description
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
See related
Ensembl:ENSCSEG00000000869
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See b3gat2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 12 NC_024318.1 (1017361..1048529)

Chromosome 12 - NC_024318.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112487838 Neighboring gene opioid growth factor receptor-like protein 1 Neighboring gene uncharacterized LOC112487836 Neighboring gene stromal membrane-associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024318.1 Chromosome 12 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024318.1 Reference Cse_v1.0 Primary Assembly

    Range
    1017361..1048529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008321349.3 → XP_008319571.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

    UniProtKB/TrEMBL
    A0A3P8UDF4
    Related
    ENSCSEP00000001253.1, ENSCSET00000001282.1
    Conserved Domains (1) summary
    cd00218
    Location:76 → 299
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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