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LOC103386423 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103386423, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103386423
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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Genomic context

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See LOC103386423 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 11 NC_024317.1 (13083646..13087588, complement)

Chromosome 11 - NC_024317.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112487706 Neighboring gene Rho related BTB domain containing 3 Neighboring gene elongation factor for RNA polymerase II 2 Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene calpastatin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024317.1 Chromosome 11 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024317.1 Reference Cse_v1.0 Primary Assembly

    Range
    13083646..13087588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008320676.3 → XP_008318898.2  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:72 → 336
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_008320675.3 → XP_008318897.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1

    Conserved Domains (1) summary
    cl11394
    Location:72 → 336
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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