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LOC103384136 galactosylceramide sulfotransferase-like [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103384136, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103384136
Gene description
galactosylceramide sulfotransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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Genomic context

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See LOC103384136 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 9 NC_024315.1 (15824860..15828177, complement)

Chromosome 9 - NC_024315.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene ATP-binding cassette sub-family A member 1-like Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene serine/threonine-protein kinase pim-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024315.1 Chromosome 9 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024315.1 Reference Cse_v1.0 Primary Assembly

    Range
    15824860..15828177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025058957.1 → XP_024914725.1  galactosylceramide sulfotransferase-like

    UniProtKB/TrEMBL
    A0A3P8W7W4
    Conserved Domains (1) summary
    cl22970
    Location:13 → 423
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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