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dpy19l3 dpy-19 like C-mannosyltransferase 3 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103378626, updated on 11-Mar-2024

Summary

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Gene symbol
dpy19l3
Gene description
dpy-19 like C-mannosyltransferase 3
See related
Ensembl:ENSCSEG00000000368
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See dpy19l3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 5 NC_024311.1 (1241049..1282171)

Chromosome 5 - NC_024311.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112487034 Neighboring gene zinc finger protein 507 Neighboring gene neural-cadherin-like Neighboring gene uncharacterized LOC107988608

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024311.1 Chromosome 5 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L3
Names
dpy-19 like 3
dpy-19-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024311.1 Reference Cse_v1.0 Primary Assembly

    Range
    1241049..1282171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008309901.2 → XP_008308123.1  probable C-mannosyltransferase DPY19L3 isoform X3

    UniProtKB/TrEMBL
    A0A3P8UFD7, A0A3P8UJS0
    Related
    ENSCSEP00000000539.1, ENSCSET00000000565.1
    Conserved Domains (1) summary
    pfam10034
    Location:61 → 723
    Dpy19; Q-cell neuroblast polarization

  2. XM_025055665.1 → XP_024911433.1  probable C-mannosyltransferase DPY19L3 isoform X4

    UniProtKB/TrEMBL
    A0A3P8UJS0
    Conserved Domains (1) summary
    pfam10034
    Location:1 → 618
    Dpy19; Q-cell neuroblast polarisation

  3. XM_008309902.3 → XP_008308124.1  probable C-mannosyltransferase DPY19L3 isoform X5

    UniProtKB/TrEMBL
    A0A3P8UJS0
    Conserved Domains (1) summary
    pfam10034
    Location:1 → 587
    Dpy19; Q-cell neuroblast polarization

  4. XM_025055664.1 → XP_024911432.1  probable C-mannosyltransferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A3P8UFG2
    Conserved Domains (1) summary
    pfam10034
    Location:118 → 770
    Dpy19; Q-cell neuroblast polarisation

  5. XM_017032691.2 → XP_016888180.1  probable C-mannosyltransferase DPY19L3 isoform X1

    UniProtKB/TrEMBL
    A0A3P8UFF2, A0A3P8UFG2
    Related
    ENSCSEP00000000554.1, ENSCSET00000000580.1
Nucleotide Protein
Heading Accession and Version

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