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st3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103377685, updated on 11-Mar-2024

Summary

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Gene symbol
st3gal4
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
zebrafish all
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Genomic context

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See st3gal4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 4 NC_024310.1 (1920931..1931114, complement)

Chromosome 4 - NC_024310.1Genomic Context describing neighboring genes Neighboring gene Fli-1 proto-oncogene, ETS transcription factor Neighboring gene potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 1 Neighboring gene potassium inwardly rectifying channel subfamily J member 5 Neighboring gene uncharacterized LOC112486912 Neighboring gene uncharacterized LOC107988508 Neighboring gene SRP receptor subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024310.1 Chromosome 4 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024310.1 Reference Cse_v1.0 Primary Assembly

    Range
    1920931..1931114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017032176.2 → XP_016887665.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

RNA

  1. XR_001760000.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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