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LOC103352541 uncharacterized LOC103352541 [ Homo sapiens (human) ]

Gene ID: 103352541, updated on 17-Sep-2024

Summary

Gene symbol
LOC103352541
Gene description
uncharacterized LOC103352541
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in thyroid (RPKM 1.2), endometrium (RPKM 0.1) and 3 other tissues See more
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Genomic context

See LOC103352541 in Genome Data Viewer
Location:
6q24.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (139978350..139991261, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (141162062..141174969, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (140299487..140312398, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene thyroid hormone receptor interactor 4 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr6:140091503-140091680 Neighboring gene FOXO induced long non-coding RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr6:140205336-140205876 Neighboring gene VISTA enhancer hs1644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25173 Neighboring gene Sharpr-MPRA regulatory region 3903 Neighboring gene Sharpr-MPRA regulatory region 1100 Neighboring gene long intergenic non-protein coding RNA 2941 Neighboring gene uncharacterized LOC107986652 Neighboring gene uncharacterized LOC124901412 Neighboring gene uncharacterized LOC105378025

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_121624.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL357146

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    139978350..139991261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    141162062..141174969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)