U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103341105 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [ Prunus mume (Japanese apricot) ]

Gene ID: 103341105, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC103341105
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus mume
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC103341105 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
3
Annotation release Status Assembly LG Location
101 current P.mume_V1.0 (GCF_000346735.1) LG8 NC_024133.1 (15988617..15991990, complement)

Linkage Group LG8 - NC_024133.1Genomic Context describing neighboring genes Neighboring gene F-box/FBD/LRR-repeat protein At5g22700-like Neighboring gene topless-related protein 4-like Neighboring gene auxin-responsive protein IAA29-like Neighboring gene transcription factor WER-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_024133.1 Chromosome LG8 Reference P.mume_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.mume_V1.0 Primary Assembly

Genomic

  1. NC_024133.1 Reference P.mume_V1.0 Primary Assembly

    Range
    15988617..15991990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008244584.2 → XP_008242806.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_008242806.1

    Conserved Domains (1) summary
    pfam04724
    Location:12 → 361
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_008244582.2 → XP_008242804.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_008242804.1

    Conserved Domains (1) summary
    pfam04724
    Location:12 → 361
    Glyco_transf_17; Glycosyltransferase family 17

  3. XM_016796492.1 → XP_016651978.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    pfam04724
    Location:12 → 361
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases