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LOC103336393 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Prunus mume (Japanese apricot) ]

Gene ID: 103336393, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103336393
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus mume
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC103336393 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
6
Annotation release Status Assembly LG Location
101 current P.mume_V1.0 (GCF_000346735.1) LG6 NC_024131.1 (19707874..19712941)

Linkage Group LG6 - NC_024131.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103336415 Neighboring gene vacuolar protein sorting-associated protein 45 homolog Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024131.1 Chromosome LG6 Reference P.mume_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.mume_V1.0 Primary Assembly

Genomic

  1. NC_024131.1 Reference P.mume_V1.0 Primary Assembly

    Range
    19707874..19712941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008239432.1 → XP_008237654.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X1

    Conserved Domains (2) summary
    cd02537
    Location:312 → 557
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:387 → 523
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  2. XM_016795406.1 → XP_016650892.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

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