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LOC103318734 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [ Prunus mume (Japanese apricot) ]

Gene ID: 103318734, updated on 28-Dec-2023

Summary

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Gene symbol
LOC103318734
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus mume
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC103318734 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
28
Annotation release Status Assembly LG Location
101 current P.mume_V1.0 (GCF_000346735.1) LG1 NC_024126.1 (26068612..26077026)

Linkage Group LG1 - NC_024126.1Genomic Context describing neighboring genes Neighboring gene protein PIR Neighboring gene probable leucine-rich repeat receptor-like protein kinase At5g63930 Neighboring gene pentatricopeptide repeat-containing protein At5g18390, mitochondrial Neighboring gene U11/U12 small nuclear ribonucleoprotein 48 kDa protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024126.1 Chromosome LG1 Reference P.mume_V1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus mume Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.mume_V1.0 Primary Assembly

Genomic

  1. NC_024126.1 Reference P.mume_V1.0 Primary Assembly

    Range
    26068612..26077026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008220153.2 → XP_008218375.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

    Conserved Domains (7) summary
    smart00028
    Location:398 → 426
    TPR; Tetratricopeptide repeats
    COG0457
    Location:70 → 352
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:259 → 287
    TPR; TPR repeat [structural motif]
    cd15832
    Location:172 → 237
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:259 → 292
    TPR_1; Tetratricopeptide repeat
    cl10013
    Location:594 → 954
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
    cl24038
    Location:169 → 319
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
Nucleotide Protein
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