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POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103294782, updated on 30-Mar-2024

Summary

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Gene symbol
POMGNT1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See POMGNT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 9 NC_072481.1 (26366911..26377164)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370716.1 (3953938..3966090)

Chromosome 9 - NC_072481.1Genomic Context describing neighboring genes Neighboring gene RAD54 like Neighboring gene leucine rich adaptor protein 1 Neighboring gene tetraspanin 1 Neighboring gene PIK3R3 upstream open reading frame

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072481.1 Reference DD_ASM_mEF_20220401

    Range
    26366911..26377164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008151194.3 → XP_008149416.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

    Conserved Domains (2) summary
    cd02514
    Location:301 → 628
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cd13937
    Location:99 → 246
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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